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Olen nõus

Jüri Jarvet

https://www.etis.ee/CV/Jüri_Jarvet/est
17.10.1956
6398325
jyri.jarvet@kbfi.ee

Teenistuskäik

Töökohad ja ametid
2008–...   
Keemilise ja Bioloogilise Füüsika Instituut, Vanemteadur (1,00)
01.01.1991–31.12.2007   
Stockholmi Ülikool, Biokeemia ja Biofüüsika teaduskond
01.01.1980–31.12.1991   
Keemilise ja Bioloogilise Füüsika Instituut
01.01.1979–31.12.1980   
Eesti Teaduste Akadeemia Küberneetika Instituut
 
 
Haridustee
Tartu Ülikool, keemia, 1979

Kvalifikatsioon

Teaduskraadid
Jüri Jarvet, doktorikraad, 1999, (juh) Astrid Gräslund, Nuclear magnetic resonance studies of peptide structure and dynamics (Peptiidide struktuuri ja dünaamika uurimine TMR spektroskoopia abil), Stockholmi Ülikool.
 
 
Teadustöö põhisuunad
ETIS KLASSIFIKAATOR: 1. Bio- ja keskkonnateadused; 1.12. Bio- ja keskkonnateadustega seotud uuringud, näiteks biotehnoloogia, molekulaarbioloogia, rakubioloogia, biofüüsika, majandus- ja tehnoloogiauuringud

Lõppenud projektid

Juhendatud väitekirjad

Publikatsioonid

Klass
Aasta
Publikatsioon
 
1.1.
2019
Dong, Xiaolin; Svantesson, Teodor; Sholts, Sabrina B.; Wallin, Cecilia; Jarvet, Juri; Graslund, Astrid; Warmlander, Sebastian K. T. S. (2019). Copper ions induce dityrosine-linked dimers in human but not in murine islet amyloid polypeptide (IAPP/amylin). Biochemical and Biophysical Research Communications, 510 (4), 520−524.10.1016/j.bbrc.2019.01.120.
1.1.
2019
Tiiman, Ann; Jelic, Vesna; Jarvet, Juri; Jaremo, Petter; Bogdanovic, Nenad; Rigler, Rudolf; Terenius, Lars; Graslund, Astrid; Vukojevic, Vladana (2019). Amyloidogenic Nanoplaques in Blood Serum of Patients with Alzheimer's Disease Revealed by Time-Resolved Thioflavin T Fluorescence Intensity Fluctuation Analysis. Journal of Alzheimer's Disease, 68 (2), 571−582.10.3233/JAD-181144.
1.1.
2019
Wärmländer, Sebastian K. T. S.; Österlund, Nicklas; Wallin, Cecilia; Wu, Jinming; Luo, Jinghui; Tiiman, Ann; Jarvet, Jüri; Gräslund, Astrid (2019). Metal binding to the amyloid-beta peptides in the presence of biomembranes: potential mechanisms of cell toxicity. Journal of Biological Inorganic Chemistry, 24 (8), 1189−1196. DOI: 10.1007/s00775-019-01723-9.
5.1.
2019
Wallin, Cecilia; Hiruma, Yoshitaka; Wärmlander, Sebastian; Huvent, Isabelle; Jarvet, Jüri; Abrahams, Jan Pieter; Gräslund, Astrid; Lippens, Guy; Luo, Jinghui (2019). The Neuronal Tau Protein Blocks In Vitro Fibrillation of the Amyloid-beta (A beta) Peptide. Biophysical Journal, 116 (3), 306A−306A. DOI: 10.1016/j.bpj.2018.11.1657.
1.1.
2018
Adamson, J.; Nazarski, R. B.; Jarvet, J.; Pehk, T.; Aav, R. (2018). Shortfall of B3LYP in Reproducing NMR JCH Couplings in Some Isomeric Epoxy Structures with Strong Stereoelectronic Effects: A Benchmark Study on DFT Functionals. ChemPhysChem. DOI: 10.1002/cphc.201701125.
1.1.
2018
Wallin, Cecilia; Hiruma, Yoshitaka; Wärmlander, Sebastian K. T. S; Huvent, Isabelle; Jarvet, Jüri; Abrahams, Jan Pieter; Gräslund, Astrid; Lippens, Guy; Luo, Jinghui. (2018). The Neuronal Tau Protein Blocks in Vitro Fibrillation of the Amyloid-beta (A beta) Peptide at the Oligomeric Stage. Journal of the American Chemical Society, 140, 8138−8146.10.1021/jacs.7b13623.
1.1.
2018
Osterlund, Nicklas; Kulkarni, Yashraj S.; Misiaszek, Agata D.; Wallin, Cecilia; Krueger, Dennis M.; Liao, Qinghua; Rad, Farshid Mashayekhy; Jarvet, Juri; Strodel, Birgit; Warmlander, Sebastian K. T. S.; Ilag, Leopold L.; Kamerlin, Shina C. L.; Graslund, Astrid (2018). Amyloid-beta Peptide Interactions with Amphiphilic Surfactants: Electrostatic and Hydrophobic Effects. ACS Chemical Neuroscience, 9 (7), 1680−1692.10.1021/acschemneuro.8b00065.
1.1.
2017
Wallin, Cecilia; Luo, Jinghui; Jarvet, Jüri; Wärmländer, Sebastian K. T. S; Gräslund, Astrid. (2017). The Amyloid-b Peptide in Amyloid Formation Processes: Interactions with Blood Proteins and Naturally Occurring Metal Ions. Israel Journal of Chemistry, 57 (1), 1−14.10.1002/ijch.201600105.
1.1.
2017
Wallin, Cecilia; Sholts, Sabrina B.; Österlund, Nicklas; Luo, Jinghui; Jarvet, Jüri; Roos, Per M.; Ilag, Leopold; Gräslund, Astrid; Wärmlander, Sebastian K. T. S. (2017). Alzheimer's disease and cigarette smoke components: effects of nicotine, PAHs, and Cd(II), Cr(III), Pb(II), Pb(IV) ions on amyloid-beta peptide aggregation. Scientific Reports, 7, ARTN 14423.10.1038/s41598-017-13759-5.
5.1.
2017
Gräslund, Astrid;Tiiman, Ann; Jarvet, Jüri; Vukojevic, Vladana. (2017). Biophysical Studies of the Amyloid Beta Peptide Involved in Alzheimer's Disease. Biophysical Journal, 112: 61st Annual Biophysical Society Meeting, New Orleans, February 11-15 2017. Elsevier , 160−160. (Supplement 1; 3). DOI: 10.1016/j.bpj.2016.11.879.
1.1.
2016
Abelein, Axel; Jarvet, Jüri; Barth, Andreas; Gräslund, Astrid; Jens Danielsson. (2016). Ionic Strength Modulation of the Free Energy Landscape of Abeta40 Peptide Fibril Formation. Journal of American Chemical Society, 138 (21), 6893−6902.10.1021/jacs.6b04511.
1.1.
2016
Tiiman, A; Luo, J; Wallin, C; Olsson, L; Lindgren, J; Jarvet, J; Per, R; Sholts, SB; Rahimipour, S; Abrahams, JP; Karlström, AE; Gräslund, A; Wärmländer, SK. (2016). Specific Binding of Cu(II) Ions to Amyloid-Beta Peptides Bound to Aggregation-Inhibiting Molecules or SDS Micelles Creates Complexes that Generate Radical Oxygen Species. Journal of Alzheimer's Disease, 54 (3), 971−982.
1.1.
2016
Wallin, C; Kulkarni, YS; Abelein, A; Jarvet, J; Liao, Q; Strodel, B; Olsson, L; Luo, J; Abrahams, JP; Sholts, SB; Roos, PM; Kamerlin, SC; Gräslund, A; Wärmländer, SK. (2016). Characterization of Mn(II) ion binding to the amyloid-β peptide in Alzheimer's disease. Journal of Trace Elements in Medicine and Biology, 38, 183−193.
5.2.
2016
Tiiman, A; Jarvet, J; Gräslund, A; Vukojevic, V. (2016). Heterogeneity and Turnover of Intermediates during Amyloid‑β(Aβ) Peptide Aggregation Studied by Fluorescence Correlation Spectroscopy. 58.
1.1.
2015
Tiiman, Ann; Jarvet, Jüri; Gräslund, Astrid; Vukojević, Vladana. (2015). Heterogeneity and Turnover of Intermediates during Amyloid‑β (Aβ) Peptide Aggregation Studied by Fluorescence Correlation Spectroscopy. Biochemistry, 54, 7203−7211.10.1021/acs.biochem.5b00976.
1.1.
2014
Kõllo, M.; Aav, R.; Tamp, S; Jarvet, J.; Lopp, M. (2014). Asymmetric synthesis of the 2,2,3-trisubstituted cyclopentanone, D-ring fragment of 9,11-secosterols. Tetrahedron, 70 (38), 6723−6727. DOI: 10.1016/j.tet.2014.07.079.
1.1.
2014
Abelein, Axel; Abrahams, Jan Pieter; Danielsson, Jens; Gräslund, Astrid; Jarvet, Jüri; Luo, Jinghui; Tiiman, Ann; Wärmlander, Sebastian K T S. (2014). The hairpin conformation of the amyloid beta peptide is an important structural motif along the aggregation pathway. Journal of biological inorganic chemistry, 19, 623−634.
1.1.
2014
Wang, Chao; Klechikov, Alexey G; Gharibyan, Anna L.; Wärmländer, Sebastian K. T. S.; Jarvet, Jüri; Zhao, Lina; Jia, Xueen; Shankar, S. K. ; Olofsson, Anders; Brännström, Thomas; Mu, Yuguang; Gräslund, Astrid; Morozova-Roche, Ludmilla A. (2014). The role of pro-inflammatory S100A9 in Alzheimer's disease amyloid-neuroinflammatory cascade. Acta Neuropathologica, 127 (4), 507−522.
5.2.
2014
Rigler, Rudolf;Vitali, Marco;Nikelic, Stanko; Krmpot, Alexander; Jarvet, Jüri; Terenius, Lars; Vukojevic, Vladana. (2014). Multipoint FCS in 3D Analysis of Single Cells. 20th International Workshop on "Single Molecule Spectroscopy and Super-resolution Microscopy in the Life Sciences", September 2-5, 2014, Berlin. 77.
1.1.
2013
Parve, O.; Reile, I.; Parve, J.; Kasvandik, S.; Kudrjashova, M.; Tamp, S.; Metsala, A.; Villo, L.; Pehk, T.; Jarvet, J.; Vares, L. (2013). An NMR and MD Modeling Insight into Nucleation of 1,2-Alkanediols; Selective Crystallization of Lipase-Catalytically Resolved Enantiomers from the Reaction Mixtures. The Journal of Organic Chemistry, 78 (24), 12795−12801. DOI: 10.1021/jo402189e.
1.1.
2013
Tsanev, Robert; Vanatalu, Kalju; Jarvet, Jüri; Jüristo, Tanner, Risto; Laur, Kristi; Tiigimägi, Piret; Kragelund, Birthe B.; Østerlund, Torben; Kogerman, Priit (2013). The Transcriptional Repressor Domain of Gli3 Is Intrinsically Disordered. PLoS ONE, 8 (10), e76972.
1.1.
2013
Wärmlander, Sebastian; Tiiman, Ann; Abelein, Axel; Luo, Jinghui; Jarvet, Jüri; Söderberg, Kajsa L; Danielsson, Jens; Gräslund, Astrid. (2013). Biophysical Studies of the Amyloid beta-Peptide: Interactions with Metal Ions and Small Molecules. Chembiochem : a European journal of chemical biology, 14 (14), 1692−1704.
5.2.
2013
Tiiman, Ann; Abelein, Axel; Wärmländer, Sebastian; Jarvet, Jüri; Gräslund, Astrid. (2013). Amyloid beta-peptide interactions with Minocycline. 3rd Bio-NMR annual User Meeting, Budapest, 10-13 June. 86.
1.1.
2012
Wahlström, Anna; Cukalevski, Risto; Danielsson, Jens; Jarvet, Jüri; Onagi, Hideki; Rebek Jr., Julius; Linse, Sara; Gräslund, Astrid (2012). Specific Binding of a β-Cyclodextrin Dimer to the Amyloid β Peptide Modulates the Peptide Aggregation Process. Biochemistry, 51 (21), 4280−4289.10.1021/bi300341j.
5.2.
2012
Abelein, Axel; Danielsson, Jens; Jarvet, Jüri; Lang, Lisa; Wärmländer, Sebastian; Gräslund, Astrid. (2012). The secondary structure transitions of Amyloid b-peptide Ab(1-40) observed by circular dichroism spectroscopy. Cutting Edge Biophysics Swedish-Danish Biophysics Meeting, Tällberg, Sweden, 7-9 September.
5.2.
2012
Abelein, Axel; Danielsson, Jens; Jarvet, Jüri; Lang, Lisa; Wärmländer, Sebastian; Gräslund, Astrid. (2012). Secondary structure transitions of Alzheimer peptide Ab1-40. Cutting Edge Biophysics, Tällberg, Swedwn, 7-9 September 2012. 36.
5.2.
2011
Suun, S.; Pehk, T.; Kaljuste, K.; Tamp, S.; Jarvet, J.; Aav, R. (2011). Bitsüklo[3.3.0]oktaanide suhtelise konfiguratsiooni määramine 1H-13C spinn-spinn sidestuskonstantide abil. Teaduskonverentsi teesid: XXXII Eesti Keemiapäevad. Tartu Ülikooli Kirjastus, 96.
5.2.
2011
Ikart, Anna-Liisa; Zetterström Fernaeus, Sandra; Jarvet, Jüri; Land, Tiit (2011). LIPOPOLÜSAHHARIIDI JA DIFENÜLEENIODIIDI NING N-ATSETÜÜLTSÜSTEIINI TOIME MIKROGLIIA RAKKUDE TSÜTOPLASMAATILISELE RAUALE NING PÕLETIKULISTE PROTSESSIDE UURIMINE TUUMAMAGNETRESONANTSSPEKTROSKOOPIAGA. TEADUSKONVERENTSI TEESID: XXXII Eesti Keemiapäevad, Tartu, 14-15.04.2011. Tartu: Tartu Ülikooli Kirjastus, 26.
5.1.
2009
Tsanev, R.; Tanner, R.; Jarvet, J.; Østerlund, T.; Vanatalu, K.; Kogerman, P. (2009). The repressor domain of Gli3, a transcription factor of Hedgehog signaling pathway, is intrinsically disordered. VIII European Symposium of The Protein Society, Zurich, Jun. 14-18.
5.1.
2009
Perálvarez-Marín, Alex; Wahlström, Anna; Lind, Jesper; Hugonin, Loïc; Jarvet, Jüri; Mäler, Lena; Barth, Andreas; Gräslund, Astrid (2009). Amyloid-like Misfolding Of Peptides By Membrane Mimicking Environments. Biophysical Journal, 96 (3), 93a.
5.2.
2009
Wahlström, Anna; Hugonin, Loïc; Perálvarez-Marín, Alex; Jarvet, Jüri; Gräslund, Astrid. (2009). Secondary Structure Conversions of Alzheimer’s Ab(1-40) Peptide Induced by Membrane- Mimicking Detergents. Keystone Symposia Conference. B8: Frontiers of NMR in Biology, February 15 - 20, 2009, Santa Fe, New Mexico, USA.
1.1.
2008
Wahlström, Anna; Hugonin, Loic; Jarvet, Jüri; Gräslund, Astrid. (2008). Secondary Structure Conversions of Alzheimer's Aβ(1-40) Peptide Induced by Membrane-Mimicking Detergents. FEBS Journal, 275 (20), 5117−5128.
1.1.
2008
Westerlund, Kristina; Moran, Sean D; Privett, Heidi K; Hay, Sam, Jarvet, Jüri; Gibney, Bryan R; Tommos, Cecilia. (2008). Making a single-chain four-helix bundle for redox chemistry studies. Protein Engineering, 21 (11), 645−652.
1.1.
2007
Jarvet, Jüri; Danielsson, Jens; Oleszczuk, Marta, Gräslund Astrid (2007). Positioning of the Alzheimer Abeta(1-40) peptide in SDS micelles using NMR and paramagnetic probes. Journal of Biomolecular NMR, 39 (1), 63−72.
1.1.
2007
Massad, T.; Jarvet, J.; Tanner, R.; Tomson, K.; Smirnova, J.; Palumaa, P.; Sugai, M.; Kohno, T.; Vanatalu, K.; Damberg, P. (2007). Maximum entropy reconstruction of joint phi, psi-distribution with a coil-library prior: the backbone conformation of the peptide hormone motilin in aqueous solution from phi and psi-dependent J-couplings. Journal of Biomolecular NMR, 38 (2), 107−123.
1.1.
2006
Papadopoulos, Evangelos; Oglecka, Kamila; Mäler, Lena; Jarvet, Jüri; Wright, P.E.; Dyson, H.J.; Gräslund, Astrid (2006). NMR solution structure of the peptide fragment 1-30, derived from unprocessed mouse Doppel protein, in DHPC micelles. Biochemistry, 45, 159−166.
1.1.
2006
Danielsson, Jens; Andersson, August; Jarvet, Jüri; Gräslund, Astrid (2006). 15N relaxation study of the amyloid beta-peptide: structural propensities and persistence length. MAGNETIC RESONANCE IN CHEMISTRY, 44, 114−121.
1.1.
2006
Vaher, Merike; Viirlaid, Säde; Ehrlich, Kersti; Mahlapuu, Riina; Jarvet, Jüri; Soomets, Ursel; Kaljurand, Mihkel. (2006). Characterization of the antioxidative activity of novel nontoxic neuropeptides by using capillary electrophoresis. Electrophoresis, 13, 2582−2589.
1.1.
2005
Danielsson, J; Jarvet, J; Gräslund, A. (2005). The Alzheimer beta-peptide shows a temperature-dependent transition between a left-handed 3(1)-helix and random coil in an N-terminal domain. Biophysical Journal, 88, 209A.
1.1.
2005
Damberg, P.; Jarvet, J.; Graslund, A. (2005). Limited variations in N-15 CSA magnitudes and orientations in ubiquitin are revealed by joint analysis of longitudinal and transverse NMR relaxation. Journal of the American Chemical Society, 127, 1995−2005. DOI: 10.1021/ja045956e.
1.1.
2005
Lindskog, M.; Spenger, C.; Klason, T.; Jarvet, J.; Graslund, A.; Johnsen, JI.; Ponthan, F.; Douglas, L.; Nordell, B.; Kogner, P. (2005). Proton magnetic resonance spectroscopy in neuroblastoma: Current status, prospects and limitations. Cancer Letters, 228, 247−255.
1.1.
2005
Danielsson, J.; Jarvet, J.; Damberg, P.; Gräslund, A. (2005). The Alzheimer b-peptide shows temperature-dependent transitions between left-handed 31-helix, b-strand and random coil secondary structures. FEBS Journal, 272 (15), 3938−3949.
5.2.
2005
Tomson, K.; Vanatalu, K.; Smirnova, J.; Palumaa, P.; Tanner, R.; Jarvet, J.; Gräslund, A. (2005). Production and labeling of recombinant motilin in Escherichia coli. International Conference on Environmental, Industrial and Applied Microbiology, Badajoz, Spain, 15-18 March 2005.
1.1.
2004
Gräslund, A; Lundberg, P; Magzoub, M;Lindberg, M;Hallbrink, M;Jarvet, J;Eriksson, G;Langel, U (2004). Cell membrane translocation and secondary structure conversion of the N-terminal (1-28) part of the prion protein. Biophysical Journal, 86, 559A.
1.1.
2004
Danielsson, J.; Jarvet, J.; Damberg, P.; Gräslund, A. (2004). Two-Site Binding of b-Cyclodextrin to the Alzheimer Ab(1-40) Peptide Measured with Combined PFG-NMR Diffusion and Induced Chemical Shifts. Biochemistry, 43 (20), 6261−6269.
1.1.
2004
Lindskog, M.; Jarvet, J.; Gräslund, A.; Kogner, P. (2004). Monitoring intracellular metabolites in neuroblastoma with 1H NMR spectroscopy: effects of growth factor withdrawal and modulation of lipid metabolism. Spectroscopy, 18 (2), 123−132.
1.1.
2004
Päiviö, A.;Jarvet, J.; Gräslund, A.; Lannfelt, L.; Westlind-Danielsson, A. (2004). Unique Physicochemical Profile of b-Amyloid Peptide Variant Ab1-40E22G Protofibrils: Conceivable Neuropathogen in Arctic Mutant Carriers. Journal of Molecular Biology, 145−159.
1.1.
2004
Lindskog, M.; Spenger, C.; Jarvet, J.; Gräslund, A.; Kogner, P. (2004). Predicting resistance or response to chemotherapy by proton magnetic resonance spectroscopy in neuroblastoma. Journal of the National Cancer Institute, 96 (19), 1457−1466.
1.1.
2003
Jarvet, J.; Damberg, P.; Danielsson, J. et. al. (2003). A left-handed 3(1) helical conformation in the Alzheimer A beta (12-28) peptide. FEBS Letters, 555 (2), 371−374.
1.1.
2002
Danielsson, J.; Jarvet, J.; Damberg, P.; Gräslund, A. (2002). Translational diffusion measured by PFG-NMR on full length and fragments of the Alzheimer Ab(1–40) peptide. Determination of hydrodynamic radii of random coil peptides of varying length. MAGNETIC RESONANCE IN CHEMISTRY, 40 (13), S89−S97.
1.1.
2002
Lundberg, P.; Magzoub, M.; Lindberg, M.; Hällbrink, M.; Jarvet, J.; Eriksson, L.E.G.; Langel, Ü.; Gräslund, A. (2002). Cell membrane translocation of the N-terminal (1–28) part of the prion protein. Biochemical and Biophysical Research Communications, 299 (1), 85−90.
1.1.
2002
Damberg, P.; Jarvet, J.; Allard, P.; Mets, Ü.; Rigler, R.; Gräslund, A. (2002). 13C-1H NMR relaxation and fluorescence anisotropy decay study of tyrosine dynamics in motilin. Biophysical Journal, 83, 2812−2825.
5.1.
2002
Westlind-Daneilsson, A.; Paivio, A.; Jarvet, J. et al. (2002). Unique features of the beta-amyloid 1-40 peptide variant A beta 1-40E22G of Arctic mutant carriers: Protofibrils as conceivable neuropathogens in Alzheimer’s disease. Neurobiology of Aging, 23 (1, 1), S192.
5.1.
2002
Päivio, A.; Jarvet, J.; Lannfelt, I. et. al. (2002). Conceivable correlates of Alzheimer’s disease onset and neurotoxicity, nucleation phase length and secondary structure, respectively, of A beta(12-28) with position 22 amino acid substitutions. Neurobiology of Aging, 23 (1, 1), S202.
1.1.
2001
Damberg, P.; Jarvet, J.; Gräslund, A. (2001). Accurate Measurement of Translational Diffusion Coefficients: A Practical Method to Account for Nonlinear Gradients. Journal of Magnetic Resonance, 148, 343−348.
1.1.
2001
Lindberg, M.; Jarvet, J.; Langel, Ü.; Gräslund, A. (2001). Secondary Structure and Position of the Cell-Penetrating Peptide Transportan in SDS Micelles As Determined by NMR. Biochemistry, 40 (10), 3141−3149.
2.1.
2001
Damberg, P.; Jarvet, J.; Gräslund, A. (2001). Micellar Systems as Solvents in Peptide and Protein Structure Determination. Elsevier.
1.1.
2000
Jarvet, J.; Damberg, P.; Bodell, K.; Eriksson, L.E.G.; Gräslund, A. (2000). Reversible Random Coil to b-Sheet Transition and the Early Stage of Aggregation of the Ab(12-28) Fragment from the Alzheimer Peptide. Journal of the American Chemical Society, 122, 4261−4268.
1.1.
1999
Damberg P, Jarvet J, Allard P, Graslund A (1999). Quantitative estimation of magnitude and orientation of the CSA tensor from field dependence of longitudinal NMR relaxation rates. Journal of Biomolecular NMR, 27−37.
1.1.
1999
Soomets, U.; Mahlapuu, R.; Tehranian, R.; Jarvet, J.; Karelson, E.; Zilmer, M.; Iverfeldt, K.; Zorko, M.; Graslund, A.; Langel, U. (1999). Regulation of GTPase and adenylate cyclase activity by amyloid beta-peptide and its fragments in rat brain tissue. Brain Research, 850, 179−188.
1.1.
1997
Jarvet J, Zdunek J, Damberg P, Graslund A (1997). Three-dimensional structure and position of porcine motilin in sodium dodecyl sulfate micelles determined by H-1 NMR. Biochemistry, 36, 8153−8163.
25.09.2020

Jüri Jarvet

https://www.etis.ee/CV/Jüri_Jarvet/eng
17.10.1956
6398325
jyri.jarvet@kbfi.ee

Career

Institutions and positions
2008–...   
National Institute of Chemical Physics and Biophysics, Senior Researcher (1,00)
01.01.1991–31.12.2007   
Stockholm University, Dept. of Biochemistry and Biophysics
01.01.1980–31.12.1991   
National Institute of Chemical Physics and Biophysics
01.01.1979–31.12.1980   
Institute of Cybernetics,Estonian Academy of Sciences
 
 
Education
Tartu University, chemistry, 1979

Qualifications

Academic degrees
Jüri Jarvet, Doctor's Degree, 1999, (sup) Astrid Gräslund, Nuclear magnetic resonance studies of peptide structure and dynamics, Stockholm University.
 
 
Fields of research
ETIS CLASSIFICATION: 1. Biosciences and Environment; 1.12. Biotechnology, Molecular Biology, Cell Biology, Biophysics and Economic and Technological Research relating to Bio- and Environmental Sciences
 
 

Completed projects

Supervised dissertations

Publications

Category
Year
Publication
 
1.1.
2019
Dong, Xiaolin; Svantesson, Teodor; Sholts, Sabrina B.; Wallin, Cecilia; Jarvet, Juri; Graslund, Astrid; Warmlander, Sebastian K. T. S. (2019). Copper ions induce dityrosine-linked dimers in human but not in murine islet amyloid polypeptide (IAPP/amylin). Biochemical and Biophysical Research Communications, 510 (4), 520−524.10.1016/j.bbrc.2019.01.120.
1.1.
2019
Tiiman, Ann; Jelic, Vesna; Jarvet, Juri; Jaremo, Petter; Bogdanovic, Nenad; Rigler, Rudolf; Terenius, Lars; Graslund, Astrid; Vukojevic, Vladana (2019). Amyloidogenic Nanoplaques in Blood Serum of Patients with Alzheimer's Disease Revealed by Time-Resolved Thioflavin T Fluorescence Intensity Fluctuation Analysis. Journal of Alzheimer's Disease, 68 (2), 571−582.10.3233/JAD-181144.
1.1.
2019
Wärmländer, Sebastian K. T. S.; Österlund, Nicklas; Wallin, Cecilia; Wu, Jinming; Luo, Jinghui; Tiiman, Ann; Jarvet, Jüri; Gräslund, Astrid (2019). Metal binding to the amyloid-beta peptides in the presence of biomembranes: potential mechanisms of cell toxicity. Journal of Biological Inorganic Chemistry, 24 (8), 1189−1196. DOI: 10.1007/s00775-019-01723-9.
5.1.
2019
Wallin, Cecilia; Hiruma, Yoshitaka; Wärmlander, Sebastian; Huvent, Isabelle; Jarvet, Jüri; Abrahams, Jan Pieter; Gräslund, Astrid; Lippens, Guy; Luo, Jinghui (2019). The Neuronal Tau Protein Blocks In Vitro Fibrillation of the Amyloid-beta (A beta) Peptide. Biophysical Journal, 116 (3), 306A−306A. DOI: 10.1016/j.bpj.2018.11.1657.
1.1.
2018
Adamson, J.; Nazarski, R. B.; Jarvet, J.; Pehk, T.; Aav, R. (2018). Shortfall of B3LYP in Reproducing NMR JCH Couplings in Some Isomeric Epoxy Structures with Strong Stereoelectronic Effects: A Benchmark Study on DFT Functionals. ChemPhysChem. DOI: 10.1002/cphc.201701125.
1.1.
2018
Wallin, Cecilia; Hiruma, Yoshitaka; Wärmlander, Sebastian K. T. S; Huvent, Isabelle; Jarvet, Jüri; Abrahams, Jan Pieter; Gräslund, Astrid; Lippens, Guy; Luo, Jinghui. (2018). The Neuronal Tau Protein Blocks in Vitro Fibrillation of the Amyloid-beta (A beta) Peptide at the Oligomeric Stage. Journal of the American Chemical Society, 140, 8138−8146.10.1021/jacs.7b13623.
1.1.
2018
Osterlund, Nicklas; Kulkarni, Yashraj S.; Misiaszek, Agata D.; Wallin, Cecilia; Krueger, Dennis M.; Liao, Qinghua; Rad, Farshid Mashayekhy; Jarvet, Juri; Strodel, Birgit; Warmlander, Sebastian K. T. S.; Ilag, Leopold L.; Kamerlin, Shina C. L.; Graslund, Astrid (2018). Amyloid-beta Peptide Interactions with Amphiphilic Surfactants: Electrostatic and Hydrophobic Effects. ACS Chemical Neuroscience, 9 (7), 1680−1692.10.1021/acschemneuro.8b00065.
1.1.
2017
Wallin, Cecilia; Luo, Jinghui; Jarvet, Jüri; Wärmländer, Sebastian K. T. S; Gräslund, Astrid. (2017). The Amyloid-b Peptide in Amyloid Formation Processes: Interactions with Blood Proteins and Naturally Occurring Metal Ions. Israel Journal of Chemistry, 57 (1), 1−14.10.1002/ijch.201600105.
1.1.
2017
Wallin, Cecilia; Sholts, Sabrina B.; Österlund, Nicklas; Luo, Jinghui; Jarvet, Jüri; Roos, Per M.; Ilag, Leopold; Gräslund, Astrid; Wärmlander, Sebastian K. T. S. (2017). Alzheimer's disease and cigarette smoke components: effects of nicotine, PAHs, and Cd(II), Cr(III), Pb(II), Pb(IV) ions on amyloid-beta peptide aggregation. Scientific Reports, 7, ARTN 14423.10.1038/s41598-017-13759-5.
5.1.
2017
Gräslund, Astrid;Tiiman, Ann; Jarvet, Jüri; Vukojevic, Vladana. (2017). Biophysical Studies of the Amyloid Beta Peptide Involved in Alzheimer's Disease. Biophysical Journal, 112: 61st Annual Biophysical Society Meeting, New Orleans, February 11-15 2017. Elsevier , 160−160. (Supplement 1; 3). DOI: 10.1016/j.bpj.2016.11.879.
1.1.
2016
Abelein, Axel; Jarvet, Jüri; Barth, Andreas; Gräslund, Astrid; Jens Danielsson. (2016). Ionic Strength Modulation of the Free Energy Landscape of Abeta40 Peptide Fibril Formation. Journal of American Chemical Society, 138 (21), 6893−6902.10.1021/jacs.6b04511.
1.1.
2016
Tiiman, A; Luo, J; Wallin, C; Olsson, L; Lindgren, J; Jarvet, J; Per, R; Sholts, SB; Rahimipour, S; Abrahams, JP; Karlström, AE; Gräslund, A; Wärmländer, SK. (2016). Specific Binding of Cu(II) Ions to Amyloid-Beta Peptides Bound to Aggregation-Inhibiting Molecules or SDS Micelles Creates Complexes that Generate Radical Oxygen Species. Journal of Alzheimer's Disease, 54 (3), 971−982.
1.1.
2016
Wallin, C; Kulkarni, YS; Abelein, A; Jarvet, J; Liao, Q; Strodel, B; Olsson, L; Luo, J; Abrahams, JP; Sholts, SB; Roos, PM; Kamerlin, SC; Gräslund, A; Wärmländer, SK. (2016). Characterization of Mn(II) ion binding to the amyloid-β peptide in Alzheimer's disease. Journal of Trace Elements in Medicine and Biology, 38, 183−193.
5.2.
2016
Tiiman, A; Jarvet, J; Gräslund, A; Vukojevic, V. (2016). Heterogeneity and Turnover of Intermediates during Amyloid‑β(Aβ) Peptide Aggregation Studied by Fluorescence Correlation Spectroscopy. 58.
1.1.
2015
Tiiman, Ann; Jarvet, Jüri; Gräslund, Astrid; Vukojević, Vladana. (2015). Heterogeneity and Turnover of Intermediates during Amyloid‑β (Aβ) Peptide Aggregation Studied by Fluorescence Correlation Spectroscopy. Biochemistry, 54, 7203−7211.10.1021/acs.biochem.5b00976.
1.1.
2014
Kõllo, M.; Aav, R.; Tamp, S; Jarvet, J.; Lopp, M. (2014). Asymmetric synthesis of the 2,2,3-trisubstituted cyclopentanone, D-ring fragment of 9,11-secosterols. Tetrahedron, 70 (38), 6723−6727. DOI: 10.1016/j.tet.2014.07.079.
1.1.
2014
Abelein, Axel; Abrahams, Jan Pieter; Danielsson, Jens; Gräslund, Astrid; Jarvet, Jüri; Luo, Jinghui; Tiiman, Ann; Wärmlander, Sebastian K T S. (2014). The hairpin conformation of the amyloid beta peptide is an important structural motif along the aggregation pathway. Journal of biological inorganic chemistry, 19, 623−634.
1.1.
2014
Wang, Chao; Klechikov, Alexey G; Gharibyan, Anna L.; Wärmländer, Sebastian K. T. S.; Jarvet, Jüri; Zhao, Lina; Jia, Xueen; Shankar, S. K. ; Olofsson, Anders; Brännström, Thomas; Mu, Yuguang; Gräslund, Astrid; Morozova-Roche, Ludmilla A. (2014). The role of pro-inflammatory S100A9 in Alzheimer's disease amyloid-neuroinflammatory cascade. Acta Neuropathologica, 127 (4), 507−522.
5.2.
2014
Rigler, Rudolf;Vitali, Marco;Nikelic, Stanko; Krmpot, Alexander; Jarvet, Jüri; Terenius, Lars; Vukojevic, Vladana. (2014). Multipoint FCS in 3D Analysis of Single Cells. 20th International Workshop on "Single Molecule Spectroscopy and Super-resolution Microscopy in the Life Sciences", September 2-5, 2014, Berlin. 77.
1.1.
2013
Parve, O.; Reile, I.; Parve, J.; Kasvandik, S.; Kudrjashova, M.; Tamp, S.; Metsala, A.; Villo, L.; Pehk, T.; Jarvet, J.; Vares, L. (2013). An NMR and MD Modeling Insight into Nucleation of 1,2-Alkanediols; Selective Crystallization of Lipase-Catalytically Resolved Enantiomers from the Reaction Mixtures. The Journal of Organic Chemistry, 78 (24), 12795−12801. DOI: 10.1021/jo402189e.
1.1.
2013
Tsanev, Robert; Vanatalu, Kalju; Jarvet, Jüri; Jüristo, Tanner, Risto; Laur, Kristi; Tiigimägi, Piret; Kragelund, Birthe B.; Østerlund, Torben; Kogerman, Priit (2013). The Transcriptional Repressor Domain of Gli3 Is Intrinsically Disordered. PLoS ONE, 8 (10), e76972.
1.1.
2013
Wärmlander, Sebastian; Tiiman, Ann; Abelein, Axel; Luo, Jinghui; Jarvet, Jüri; Söderberg, Kajsa L; Danielsson, Jens; Gräslund, Astrid. (2013). Biophysical Studies of the Amyloid beta-Peptide: Interactions with Metal Ions and Small Molecules. Chembiochem : a European journal of chemical biology, 14 (14), 1692−1704.
5.2.
2013
Tiiman, Ann; Abelein, Axel; Wärmländer, Sebastian; Jarvet, Jüri; Gräslund, Astrid. (2013). Amyloid beta-peptide interactions with Minocycline. 3rd Bio-NMR annual User Meeting, Budapest, 10-13 June. 86.
1.1.
2012
Wahlström, Anna; Cukalevski, Risto; Danielsson, Jens; Jarvet, Jüri; Onagi, Hideki; Rebek Jr., Julius; Linse, Sara; Gräslund, Astrid (2012). Specific Binding of a β-Cyclodextrin Dimer to the Amyloid β Peptide Modulates the Peptide Aggregation Process. Biochemistry, 51 (21), 4280−4289.10.1021/bi300341j.
5.2.
2012
Abelein, Axel; Danielsson, Jens; Jarvet, Jüri; Lang, Lisa; Wärmländer, Sebastian; Gräslund, Astrid. (2012). The secondary structure transitions of Amyloid b-peptide Ab(1-40) observed by circular dichroism spectroscopy. Cutting Edge Biophysics Swedish-Danish Biophysics Meeting, Tällberg, Sweden, 7-9 September.
5.2.
2012
Abelein, Axel; Danielsson, Jens; Jarvet, Jüri; Lang, Lisa; Wärmländer, Sebastian; Gräslund, Astrid. (2012). Secondary structure transitions of Alzheimer peptide Ab1-40. Cutting Edge Biophysics, Tällberg, Swedwn, 7-9 September 2012. 36.
5.2.
2011
Suun, S.; Pehk, T.; Kaljuste, K.; Tamp, S.; Jarvet, J.; Aav, R. (2011). Bitsüklo[3.3.0]oktaanide suhtelise konfiguratsiooni määramine 1H-13C spinn-spinn sidestuskonstantide abil. Teaduskonverentsi teesid: XXXII Eesti Keemiapäevad. Tartu Ülikooli Kirjastus, 96.
5.2.
2011
Ikart, Anna-Liisa; Zetterström Fernaeus, Sandra; Jarvet, Jüri; Land, Tiit (2011). LIPOPOLÜSAHHARIIDI JA DIFENÜLEENIODIIDI NING N-ATSETÜÜLTSÜSTEIINI TOIME MIKROGLIIA RAKKUDE TSÜTOPLASMAATILISELE RAUALE NING PÕLETIKULISTE PROTSESSIDE UURIMINE TUUMAMAGNETRESONANTSSPEKTROSKOOPIAGA. TEADUSKONVERENTSI TEESID: XXXII Eesti Keemiapäevad, Tartu, 14-15.04.2011. Tartu: Tartu Ülikooli Kirjastus, 26.
5.1.
2009
Tsanev, R.; Tanner, R.; Jarvet, J.; Østerlund, T.; Vanatalu, K.; Kogerman, P. (2009). The repressor domain of Gli3, a transcription factor of Hedgehog signaling pathway, is intrinsically disordered. VIII European Symposium of The Protein Society, Zurich, Jun. 14-18.
5.1.
2009
Perálvarez-Marín, Alex; Wahlström, Anna; Lind, Jesper; Hugonin, Loïc; Jarvet, Jüri; Mäler, Lena; Barth, Andreas; Gräslund, Astrid (2009). Amyloid-like Misfolding Of Peptides By Membrane Mimicking Environments. Biophysical Journal, 96 (3), 93a.
5.2.
2009
Wahlström, Anna; Hugonin, Loïc; Perálvarez-Marín, Alex; Jarvet, Jüri; Gräslund, Astrid. (2009). Secondary Structure Conversions of Alzheimer’s Ab(1-40) Peptide Induced by Membrane- Mimicking Detergents. Keystone Symposia Conference. B8: Frontiers of NMR in Biology, February 15 - 20, 2009, Santa Fe, New Mexico, USA.
1.1.
2008
Wahlström, Anna; Hugonin, Loic; Jarvet, Jüri; Gräslund, Astrid. (2008). Secondary Structure Conversions of Alzheimer's Aβ(1-40) Peptide Induced by Membrane-Mimicking Detergents. FEBS Journal, 275 (20), 5117−5128.
1.1.
2008
Westerlund, Kristina; Moran, Sean D; Privett, Heidi K; Hay, Sam, Jarvet, Jüri; Gibney, Bryan R; Tommos, Cecilia. (2008). Making a single-chain four-helix bundle for redox chemistry studies. Protein Engineering, 21 (11), 645−652.
1.1.
2007
Jarvet, Jüri; Danielsson, Jens; Oleszczuk, Marta, Gräslund Astrid (2007). Positioning of the Alzheimer Abeta(1-40) peptide in SDS micelles using NMR and paramagnetic probes. Journal of Biomolecular NMR, 39 (1), 63−72.
1.1.
2007
Massad, T.; Jarvet, J.; Tanner, R.; Tomson, K.; Smirnova, J.; Palumaa, P.; Sugai, M.; Kohno, T.; Vanatalu, K.; Damberg, P. (2007). Maximum entropy reconstruction of joint phi, psi-distribution with a coil-library prior: the backbone conformation of the peptide hormone motilin in aqueous solution from phi and psi-dependent J-couplings. Journal of Biomolecular NMR, 38 (2), 107−123.
1.1.
2006
Papadopoulos, Evangelos; Oglecka, Kamila; Mäler, Lena; Jarvet, Jüri; Wright, P.E.; Dyson, H.J.; Gräslund, Astrid (2006). NMR solution structure of the peptide fragment 1-30, derived from unprocessed mouse Doppel protein, in DHPC micelles. Biochemistry, 45, 159−166.
1.1.
2006
Danielsson, Jens; Andersson, August; Jarvet, Jüri; Gräslund, Astrid (2006). 15N relaxation study of the amyloid beta-peptide: structural propensities and persistence length. MAGNETIC RESONANCE IN CHEMISTRY, 44, 114−121.
1.1.
2006
Vaher, Merike; Viirlaid, Säde; Ehrlich, Kersti; Mahlapuu, Riina; Jarvet, Jüri; Soomets, Ursel; Kaljurand, Mihkel. (2006). Characterization of the antioxidative activity of novel nontoxic neuropeptides by using capillary electrophoresis. Electrophoresis, 13, 2582−2589.
1.1.
2005
Danielsson, J; Jarvet, J; Gräslund, A. (2005). The Alzheimer beta-peptide shows a temperature-dependent transition between a left-handed 3(1)-helix and random coil in an N-terminal domain. Biophysical Journal, 88, 209A.
1.1.
2005
Damberg, P.; Jarvet, J.; Graslund, A. (2005). Limited variations in N-15 CSA magnitudes and orientations in ubiquitin are revealed by joint analysis of longitudinal and transverse NMR relaxation. Journal of the American Chemical Society, 127, 1995−2005. DOI: 10.1021/ja045956e.
1.1.
2005
Lindskog, M.; Spenger, C.; Klason, T.; Jarvet, J.; Graslund, A.; Johnsen, JI.; Ponthan, F.; Douglas, L.; Nordell, B.; Kogner, P. (2005). Proton magnetic resonance spectroscopy in neuroblastoma: Current status, prospects and limitations. Cancer Letters, 228, 247−255.
1.1.
2005
Danielsson, J.; Jarvet, J.; Damberg, P.; Gräslund, A. (2005). The Alzheimer b-peptide shows temperature-dependent transitions between left-handed 31-helix, b-strand and random coil secondary structures. FEBS Journal, 272 (15), 3938−3949.
5.2.
2005
Tomson, K.; Vanatalu, K.; Smirnova, J.; Palumaa, P.; Tanner, R.; Jarvet, J.; Gräslund, A. (2005). Production and labeling of recombinant motilin in Escherichia coli. International Conference on Environmental, Industrial and Applied Microbiology, Badajoz, Spain, 15-18 March 2005.
1.1.
2004
Gräslund, A; Lundberg, P; Magzoub, M;Lindberg, M;Hallbrink, M;Jarvet, J;Eriksson, G;Langel, U (2004). Cell membrane translocation and secondary structure conversion of the N-terminal (1-28) part of the prion protein. Biophysical Journal, 86, 559A.
1.1.
2004
Danielsson, J.; Jarvet, J.; Damberg, P.; Gräslund, A. (2004). Two-Site Binding of b-Cyclodextrin to the Alzheimer Ab(1-40) Peptide Measured with Combined PFG-NMR Diffusion and Induced Chemical Shifts. Biochemistry, 43 (20), 6261−6269.
1.1.
2004
Lindskog, M.; Jarvet, J.; Gräslund, A.; Kogner, P. (2004). Monitoring intracellular metabolites in neuroblastoma with 1H NMR spectroscopy: effects of growth factor withdrawal and modulation of lipid metabolism. Spectroscopy, 18 (2), 123−132.
1.1.
2004
Päiviö, A.;Jarvet, J.; Gräslund, A.; Lannfelt, L.; Westlind-Danielsson, A. (2004). Unique Physicochemical Profile of b-Amyloid Peptide Variant Ab1-40E22G Protofibrils: Conceivable Neuropathogen in Arctic Mutant Carriers. Journal of Molecular Biology, 145−159.
1.1.
2004
Lindskog, M.; Spenger, C.; Jarvet, J.; Gräslund, A.; Kogner, P. (2004). Predicting resistance or response to chemotherapy by proton magnetic resonance spectroscopy in neuroblastoma. Journal of the National Cancer Institute, 96 (19), 1457−1466.
1.1.
2003
Jarvet, J.; Damberg, P.; Danielsson, J. et. al. (2003). A left-handed 3(1) helical conformation in the Alzheimer A beta (12-28) peptide. FEBS Letters, 555 (2), 371−374.
1.1.
2002
Danielsson, J.; Jarvet, J.; Damberg, P.; Gräslund, A. (2002). Translational diffusion measured by PFG-NMR on full length and fragments of the Alzheimer Ab(1–40) peptide. Determination of hydrodynamic radii of random coil peptides of varying length. MAGNETIC RESONANCE IN CHEMISTRY, 40 (13), S89−S97.
1.1.
2002
Lundberg, P.; Magzoub, M.; Lindberg, M.; Hällbrink, M.; Jarvet, J.; Eriksson, L.E.G.; Langel, Ü.; Gräslund, A. (2002). Cell membrane translocation of the N-terminal (1–28) part of the prion protein. Biochemical and Biophysical Research Communications, 299 (1), 85−90.
1.1.
2002
Damberg, P.; Jarvet, J.; Allard, P.; Mets, Ü.; Rigler, R.; Gräslund, A. (2002). 13C-1H NMR relaxation and fluorescence anisotropy decay study of tyrosine dynamics in motilin. Biophysical Journal, 83, 2812−2825.
5.1.
2002
Westlind-Daneilsson, A.; Paivio, A.; Jarvet, J. et al. (2002). Unique features of the beta-amyloid 1-40 peptide variant A beta 1-40E22G of Arctic mutant carriers: Protofibrils as conceivable neuropathogens in Alzheimer’s disease. Neurobiology of Aging, 23 (1, 1), S192.
5.1.
2002
Päivio, A.; Jarvet, J.; Lannfelt, I. et. al. (2002). Conceivable correlates of Alzheimer’s disease onset and neurotoxicity, nucleation phase length and secondary structure, respectively, of A beta(12-28) with position 22 amino acid substitutions. Neurobiology of Aging, 23 (1, 1), S202.
1.1.
2001
Damberg, P.; Jarvet, J.; Gräslund, A. (2001). Accurate Measurement of Translational Diffusion Coefficients: A Practical Method to Account for Nonlinear Gradients. Journal of Magnetic Resonance, 148, 343−348.
1.1.
2001
Lindberg, M.; Jarvet, J.; Langel, Ü.; Gräslund, A. (2001). Secondary Structure and Position of the Cell-Penetrating Peptide Transportan in SDS Micelles As Determined by NMR. Biochemistry, 40 (10), 3141−3149.
2.1.
2001
Damberg, P.; Jarvet, J.; Gräslund, A. (2001). Micellar Systems as Solvents in Peptide and Protein Structure Determination. Elsevier.
1.1.
2000
Jarvet, J.; Damberg, P.; Bodell, K.; Eriksson, L.E.G.; Gräslund, A. (2000). Reversible Random Coil to b-Sheet Transition and the Early Stage of Aggregation of the Ab(12-28) Fragment from the Alzheimer Peptide. Journal of the American Chemical Society, 122, 4261−4268.
1.1.
1999
Damberg P, Jarvet J, Allard P, Graslund A (1999). Quantitative estimation of magnitude and orientation of the CSA tensor from field dependence of longitudinal NMR relaxation rates. Journal of Biomolecular NMR, 27−37.
1.1.
1999
Soomets, U.; Mahlapuu, R.; Tehranian, R.; Jarvet, J.; Karelson, E.; Zilmer, M.; Iverfeldt, K.; Zorko, M.; Graslund, A.; Langel, U. (1999). Regulation of GTPase and adenylate cyclase activity by amyloid beta-peptide and its fragments in rat brain tissue. Brain Research, 850, 179−188.
1.1.
1997
Jarvet J, Zdunek J, Damberg P, Graslund A (1997). Three-dimensional structure and position of porcine motilin in sodium dodecyl sulfate micelles determined by H-1 NMR. Biochemistry, 36, 8153−8163.
25.09.2020

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IUTIUT23-7Tahkiste ja vedelike lokaalse struktuuri ja dünaamika uuringud TMR meetoditega01.01.201431.12.2019Ivo HeinmaaKeemilise ja Bioloogilise Füüsika Instituut823 800,00 EUR
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